BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038H09LP1|AL430624
(841 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1654 1578 0.0
>3x_Contig1654
Length = 17174
Score = 1578 bits (794), Expect = 0.0
Identities = 831/842 (98%), Gaps = 4/842 (0%)
Strand = Plus / Minus
Query: 1 gatcactggaatcatagcataaacatagcacgtcgcattcgtccaatttamctttgtttt 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 11695 gatcactggaatcatagcataaacatagcacgtcgcattcgtccaatttacctttgtttt 11636
Query: 61 ctaaaattggagtctcttgttctccaagttcttgcaagatgagataatattgcttccctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11635 ctaaaattggagtctcttgttctccaagttcttgcaagatgagataatattgcttccctc 11576
Query: 121 cttttagttctaagctattgacagaaattttgggacgtatcgtaggtgaataagcttcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11575 cttttagttctaagctattgacagaaattttgggacgtatcgtaggtgaataagcttcag 11516
Query: 181 agaagctcctacctaggaaggattccagaagagaactcttaccactattgcctttaccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11515 agaagctcctacctaggaaggattccagaagagaactcttaccactattgcctttaccca 11456
Query: 241 acatataacaattcaaaactttccggtcaaaaacaggagctctatagtaaacaccgtttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11455 acatataacaattcaaaactttccggtcaaaaacaggagctctatagtaaacaccgtttc 11396
Query: 301 tcctcctctttcttctcggctttgtgatctgaagagcgttcttggcgtctttgtcaaagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11395 tcctcctctttcttctcggctttgtgatctgaagagcgttcttggcgtctttgtcaaagc 11336
Query: 361 ccaaatatatcaaatattctgtggtaaccgaataatcaatgaaagtagtcatagaccata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11335 ccaaatatatcaaatattctgtggtaaccgaataatcaatgaaagtagtcatagaccata 11276
Query: 421 aagccagccagccctgaagtgttatgcatgctgaattattgacaacagttaaaaaaggga 480
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 11275 aagccagccagccctgaagtgttatgcatgctgaattattgacaacagtcaaaaaaggga 11216
Query: 481 aatttgtttcgatccacacagatgtggcagttctggcgtagtcttgaacaacagatgtaa 540
|||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 11215 aatttgtttcgatc--caaagatgtggcagtcctggcgtagtcttgaacaacagatgtaa 11158
Query: 541 ttcgtcattattcaacccaccgtcgttatctttatcatattttaagaacgtatcaacaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11157 ttcgtcattattcaacccaccgtcgttatctttatcatattttaagaacgtatcaacaaa 11098
Query: 601 aaatctgtaaccaagcggacttaattcgacactagagctttgcgntatgtcaattttggg 660
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 11097 aaatctgtaaccaagcggacttaattcgacactagagctttgcggtatgtcaattttggg 11038
Query: 661 gcgcaggatttttt-cattaatagttaaagtgtccgtataatggaatgctcttaatattc 719
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11037 gcgcaggattttttgcattaatagttaaagtgtccgtataatggaatgctcttaatattc 10978
Query: 720 cccatgtggtttcgtgccgtcctttttcagcgtatattttgtttaatacaagawagccgt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10977 cccatgtggtttcgtgccgtcctttttcagcgtatattttgtttaatacaagaaagccgt 10918
Query: 780 ccttcgttattcctttgcccgggaacgttaagtatataatcttcgtactcttgaytgggt 839
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 10917 ccttcgttattcctttgccc-ggaacgttaagtatataatcttcgtactcttgattgggt 10859
Query: 840 ga 841
||
Sbjct: 10858 ga 10857
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5851
Number of Sequences: 1807
Number of extensions: 5851
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 841
length of database: 10,358,551
effective HSP length: 16
effective length of query: 825
effective length of database: 10,329,639
effective search space: 8521952175
effective search space used: 8521952175
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)